SubtiBank SubtiBank
ykoS [2018-10-11 17:36:36]
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ykoS [2018-10-11 17:36:36]

unknown
locus
BSU13380
pI
9.76
mw
66.33 kDa
protein length
564 aa Sequence Blast
gene length
1692 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
ykoR
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    1,401,772 → 1,403,466

    Expression and Regulation

    Operons

    genes
    [gene|6B66E6E138ED70318E5911F310953D8F09FA8719|ykoS]-[gene|EF18470AD2B07755431534B52A8FCE6754FDBA9D|ykoT]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [Pubmed|26577401], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]

    • regulatory mechanism

  • [protein|01EF886D3D004EA9B22AC5E75D50FF07D8631E68|SpoVT]: repression, [Pubmed|26577401], in [regulon|01EF886D3D004EA9B22AC5E75D50FF07D8631E68|SpoVT regulon]

    • regulation

  • expressed late during [SW|sporulation] in the forespore ([SW|SigG], [SW|SpoVT]) [Pubmed|26577401]
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    Biological materials

    Mutant

  • MGNA-A763 (ykoS::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/763 NBRP B. subtilis, Japan]
  • BKE13380 (Δ[gene|6B66E6E138ED70318E5911F310953D8F09FA8719|ykoS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGCTTACACATCCATTT, downstream forward: _UP4_GAAACAAGATAAGGAGGATA
  • BKK13380 (Δ[gene|6B66E6E138ED70318E5911F310953D8F09FA8719|ykoS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGCTTACACATCCATTT, downstream forward: _UP4_GAAACAAGATAAGGAGGATA

    • References

  • 22383849,26577401